| SSR marker group | Reference | Species | Origin | Number of SSRs tested |
| BPPCT | Dirlewanger et al. [21] | Peach | Genomic | 22 |
| CPDCT | Mnejja et al. [22] | Almond | Genomic | 4 |
| CPPCT | Aranzana et al. [23] | Peach | Genomic | 11 |
| EPDCU | Howad et al. [24] | Almond | EST | 2 |
| EPPCU | Howad et al. [24] | Almond | EST | 2 |
| MA | Yamamoto et al. [25] | Peach | Genomic | 1 |
| PceGA | Downey and Iezzoni [26] | Cherry | Genomic | 1 |
| pchgms | Sosinski et al. [27] | Peach | cDNA | 1 |
| PMS | Cantini et al. [28] | Cherry | Genomic | 1 |
| PS | Sosinski et al. [27] | Cherry | Genomic | 1 |
| UDA | Testolin et al. [29] | Almond | Genomic | 3 |
| UDAp | Messina et al. [30] | Apricot | Genomic | 1 |
| UDP | Cipriani et al. [31] | Peach | Genomic | 21 |
| Total | 71 |